MICROBIOLOGY 101 INTERNET TEXT

CHAPTER XIII: HOW MICROBES CAUSE DISEASE


UPDATED: 10/29/99


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EXTRA CREDIT COMMENTARY 14A: Read the following article at this site. Find 3 articles (on different subjects) in the newspapers or news magazines in the last 12 months that relate to the information presented in this article and discuss these relationships briefly.


INTRODUCTION

During my all-too-brief lifetime I have seen us go from a state of virtual defenselessness against many infectious bacteria and viruses, where, outside of immunization, prayer, occasional surgery and TLC (tender-loving-care), there was little medically we could do about bacterial infections, to an era of optimistic arrogance where we claimed VICTORY over ALL BACTERIAL INFECTIONS, to the recognition today that this battle is going to go on for the indefinite future and that there is some question now as to the eventual OUTCOME.

In spite of our considerable knowledge about diseases most people in undeveloped countries still die of the same infectious diseases that killed their ancestors 10,000 years ago and that are mostly PREVENTABLE. The WHO estimates that approximately 15 million CHILDREN die each year of preventable infectious disease.

An infectious disease agent must be able to grow on or in a host and it must do harm to that host. Every infectious disease is characterized by the SYMPTOMS produced in the average victim of that infectious disease. These symptoms, referred to as the CLINICAL SYMPTOMS, are used by physicians and health care personnel to identify a particular infectious disease or group of infectious diseases. For example, one set of symptoms identify common upper respiratory diseases (colds). However, the mumps virus has a UNIQUE set of symptoms that are used in diagnosing this particular infectious agent. That is, a single pathogen may produce a clear set of symptoms that allows its easy recognition, whereas a set of identical symptoms (e.g. the "runs", colds, pneumonia) may be produced by a number of different infectious disease agents. Finally, some infectious disease agents cause a variety of different symptoms in different hosts of the same species; AIDS and tuberculosis are two such examples.

In describing an infectious disease the agent is identified, if known, the symptoms are described, along with the prognosis and the manner in which the infectious disease is contracted. Molecular biology has given us tools to rapidly identify the probable etiological agent of many common diseases. The combination of DNA fingerprinting and #PCR make it possible to obtain an accurate diagnosis from as little as 10 microliters of a patient's body fluid (blood, urine, spit, etc.) within a few hours rather than the days it has taken in the recent past. The use of fluorescent-labeled antibodies allow organisms in body fluids and tissues to be detected (identified) in a few minutes or less. New techniques (biochips) are in the pipeline that will cut diagnosis time down to a FEW SECONDS in many cases. While it is crucial, diagnosis only IDENTIFIES the etiological agent, but it does not explain how the disease process works or how the patient contacted the infectious disease agent in the first place. To see what are the most likely diseases YOU MAY SUFFER FROM visit this site.

WHAT IS A BIOCHIP?
A BIOCHIP is a small (~1 cm to one inch square) piece of plastic or glass to which 100s to 1,000s of individual unique binding molecules have been glued in a gridded pattern. Each spot on the grid contains a cluster of each of the unique molecules (e.g. antibodies or DNA molecules). A sample of unknown fluid such as blood, containing DNA, bacteria, antibodies, viruses or other unique molecules, is added to the chip and molecules in the sample are allowed to bind to the molecules on the chip. The unbound molecules are washed away. The system is designed so that a signal (usually a colored light that glows under UV) can be seen wherever something has bound to a particular molecule on the chip. The chip is scanned (usually within seconds) to detect where on the grid a molecule in the sample has bound. From the position on the grid one can identify what has bound at that point (e.g. an HIV virus particle).


OFFENSE: THE MICROBIAL WEAPONS

HOW MICROBES CAUSE DISEASE

Before a pathogen can cause a disease its host must be EXPOSED or come into physical contact with a pathogen or its toxic products. The transmission of disease-producing agents within populations is a PUBLIC HEALTH CONCERN which we will deal in Chapter 14 where the science of #EPIDEMIOLOGY is described. An infectious pathogen must be presented to its host in a way that will allow it to grow in/on the host in an environment where it can cause a disease. The bacterium Staphylococcus aureus frequently lives harmlessly in the #nose and on the skin. However, if there is a break in the skin, or if it gets into the proper food, S. aureus can cause #serious disease. Similarly, a break in the vaginal or anal mucus membranes allows the entry of a STD infectious agent that might otherwise not gain a foothold. The pathogenic E. coli strain #O157:H7 is harmless if it is rubbed on your skin, but if ingested in an undercooked hamburger or other food it can reach your intestine where it can grow, causing its host to die, or survive with seriously damaged kidneys and a few feet less of your intestine. Similarly, the toxin of the food-borne pathogen Clostridium botulinum must be delivered in a way that will allow it to be absorbed into the blood of the victim.

HOW Bordetella pertussis CAUSES WHOOPING COUGH?
Recently it has been shown that B. pertussis binds to the ciliated cells of the respiratory system that normally sweep away the mucus. They then produce two substances, tracheal cytotoxin and LPS (endotoxin) which, acting together, induces neighboring cells to produce the gas NO (nitric oxide) which kills the ciliated cell. With the ciliated cells gone the only way to clear the airways of mucus is by violent coughing which serves to expel, not only mucus, but the pathogen thus spreading it in the airborne droplets. Sci. 285:811(1999) 

Once introduced into a suitable environment, infectious agents begin to grow. At this point the non-specific defense systems of the body often eliminates the intruders without harm, but if the pathogen has the proper arsenal of weapons it may establish itself and render serious harm on the host. The experimental questions scientists ask today are about the mechanisms that a pathogen employs to establish itself and produce the subsequent disease. These disease-inducing factors are called VIRULENCE FACTORS or VIRULENCE DETERMINANTS. Identification of a pathogen's virulence determinants and an understanding of their molecular mechanisms of action, allows us to design ways to neutralize or destroy the virulence determinants, thus rendering the pathogen harmless; i.e., we can "pull its teeth"or otherwise "neutralize" it.


TERMS RELATED TO VIRULENCE

MAJOR BACTERIAL VIRULENCE DETERMINANTS

Bacterial Virulent Factors.gif (17377 bytes)
Figure 1. Virulence determinants. This cartoon illustrates the major types of known virulence determinants. A pathogen may have one or many virulent determinants. When a pathogen loses a crucial virulence determinant it becomes avirulent. Conversely, a normally non-virulent microbe may gain virulent genes and suddenly become virulent or a mildly pathogenic strain may gain an additional virulence determinant and become virulent. Virulent genes may occur through mutations in the microbes genome, or by picking up a plasmid (#conjugation) or bacteriophage carrying virulence genes (#transduction). To see a list of the virulence determinants that pathogenic E. coli can have visit this site and click on "E.coli as a pathogen"

SEPTICEMIA: This describes the case where the pathogen grows massively within the host. In effect the host becomes a virtual "culture tube" for the pathogen. Bacteria and viruses can be found in the blood and all the organs. Death often ensues when this happens.

TOXINS: Toxins are products of a pathogen that destroy/damage/inactivate one or more vital component of the host thus allowing the pathogen to survive and flourish. EXOTOXINS are toxins that are SECRETED from the cell or leak out of the cell after it dies. Generally they are soluble proteins and thus are carried throughout the body in the blood or lymph, doing damage at a distance from the infection site. Toxins tend to target specific cells in the body. Some are enzymes and others are proteins that bind to and inhibit crucial cellular activities which eventually lead to the death of cells. A special group of toxins, produced only by G- bacteria, are called ENDOTOXINS or #LPS. Examples of toxic virulence determinants include:

Most exotoxins are destroyed by heating to 100oC, but some like those of #S. aureus food poisoning are resistant to boiling. Some toxins can be converted to TOXOIDS which are no longer toxic, but can stimulate #ANTIBODY PRODUCTION against the toxin. In general the toxins are so powerful that only minimal growth of the producing bacterium is required to effect the disease and the toxin can exert its effects in the absence of the bacterium that produced it.

ENZYMES: Pathogens use a variety of enzymes to assist them in establishing infection and producing a disease. There are virulence determinant enzymes that dissolve the glue between cells, thus allowing the bacteria to spread rapidly through the tissue. There are enzymes (hemolysins) that #lyse red blood cells and others that lyse white blood cells. There are enzymes that degrade DNA, lipids and proteins.

Attachments of Pathogens (3375 bytes)
Figure 2. Attachment system that bind pathogens to their hosts. On the left binding proteins, usually pili, of the pathogens attach to the receptor molecules on the surface of the host cells. The pathogen may simply use this as an anchor by which it keeps from being flushed away by a flow of material like urine or mucous or this may be the first step in a process of attacking and destroying the target cell. On the right bacteria are shown embedded within a capsule which, along with pili, binds to the each other and to the surface of a target cell. Again, the bacterial cells may use this as a way of not being washed away or it may be the preliminary step in a process that leads to the death of the target cell.

ATTACHMENT SYSTEMS: Since many of the nonspecific defenses involve mechanically flushing away pathogens, a common virulence determinant of pathogens are cell components that stick the bacteria to the target cells. Like the #attachment or docking proteins of viruses, these systems stick things to one another. Two general attachment-systems have been found. The pili are short protein rods or curled protein strands that have binding proteins on the ends that attach firmly to receptor molecules on the surface of other (host) cells. The other system is that of the capsule. #Capsules, as you recall, are composed of sugar polymers (occasionally of protein polymers) that tend to be sticky. These capsules are often produced in large quantities which entrap microbes in sticky masses. For example, the plaque on our teeth is generally composed of a group of microbes acting symbiotically together, through the production of pili and capsules, to stick (like super-glue) to our teeth, gums and tongue. Figure 2 illustrates the action of attachment systems which include pili, capsules and cell wall proteins.

SELF DESTRUCTION: Pathogens frequently cause disease by tricking the host cells into doing something they normally wouldn't do. One trick is to induce the host system to produce self-destructive chemicals that kill or inhibit its own cells. In doing this the body's own defense system is redirected towards its own destruction, leaving the invading pathogen to enjoy the delicious and nutritious remains. In fact many of the "diseases" caused by both viruses and bacteria are the result of the pathogen "throwing a chemical monkey wrench" into the finely turned and balanced machinery of the host's body. Pathogens do this by producing chemicals that mimic host's regulatory chemicals. These "FAKE" substances bind to the host's cell receptors, or regulatory sites, causing them to turn on or off at inappropriate times. By disrupting the normal processes of the host, the pathogen may escape destruction or detection; like a crook trying to escape the police who are advancing on him by yelling "fire" in a crowd.

CHANGING ANTIGENS: Pathogens often evade a host's immune system by frequently changing its surface antigens. The HIV, malaria and sleeping sickness pathogens use this strategy to avoid destruction. In these cases a pathogen produces a few antigenic variants as its population increases. Meanwhile the host responds by making antibodies only against the major antigenic form. However, the variant(s) survives, thrives and increases in number, while continuing to harm the host. The host will then mount a second vigorous antibody attack against the new variant only to have another new variant escape. Eventually, the pathogen does so much damage that the weakened host is destroyed. In effect the host's immune system is in a race with the pathogen's antigenic variation system; the winner gets to live.

CAMOUFLAGE: In this case the pathogen camouflages itself so the host doesn't recognize the invader as being "nonself" and thus dangerous. One trick is to coat itself with a capsule which the white blood cells either doesn't recognize or for some other reason avoids ingesting (a YUCK capsule), thus allowing the capsule-covered pathogen to remain free and unhindered. In other cases the pathogen may enter and hide within host cells, thus escaping the patrolling white blood cell guards and their antibody guard dogs. Some pathogens have even developed ways of moving or tunneling from one host cell to another without coming out of the cell so they avoid detection by the defending immune system.


STEPS IN THE DISEASE PROCESS

For convenience, the disease process is discussed in a series of sequential stages:

INFECTION = The pathogen establishes itself in or on the host. It overcomes or avoids the nonspecific defenses and gains a "foothold" which allows it to grow and reproduce. No symptoms are yet present and the host is unaware of the infection. However, with newer molecular biology methods (#PCR), we may soon be able to detect the presence of a pathogen at this early stage when it is more vulnerable. In many cases the host mounts a successful counter attack once the infection gets large enough for the host to detect it. For example, this is the case with ZITS.

INCUBATION PERIOD = This is the period of time it takes for the pathogen to establish itself to the point where the first disease symptoms appear. This varies widely, for most bacteria it takes 2 to five days, but for some like T.B. or leprosy it may be 20 to 30 years. For many viruses it is 3 days to two weeks, but for rabies it may take several weeks or even months, whereas AIDS may take up to 10 yr. to clinically develop if left untreated and with treatment it may take much longer.

INITIAL SYMPTOMS = These refer to the first symptoms that clearly demonstrate an illness. Since symptoms vary widely between hosts this is a statistical matter. One person may have a subclinical case, where they feel mildly ill, but with no clear symptoms, to others that show unusual symptoms that can be mistaken for other diseases. Subclinical cases (asymtomatic cases) are very common as indicated by the large number of people who have antibodies against various diseases, but who have never been clinically diagnosed as having had a given disease.

ACUTE = This refers to the classical clinical or textbook symptoms, where the disease is in full flower and the patient is usually seriously or clearly ill.

The intensity of the illness varies with the disease, the strain of the etiological agent and the condition of the patient. Some diseases like chickenpox and the "common cold" are almost always relatively mild and without complications. Others, like bubonic plague or measles are usually severe and life-threatening. Some, like rabies, Ebola and AIDS are close to being 100% fatal. In general, every infectious disease is survivable and every infectious disease can prove fatal to some people.

The symptoms and outcome of every disease is dependent on a mixture of many factors. Some of the more obvious include:

The complex interplay of these factors makes it difficult to predict the outcome of a disease of any given individual. Disease data is ENTIRELY STATISTICAL, like a horse race or the lottery.

It is very common for people to have a disease and not show any identifiable symptoms and yet to become as immune as another person who almost dies from the same disease. In the former case, the individual is said to have had a SUBCLINICAL or asymtomatic case.

RECOVERY = Period during which the symptoms decline and the patient recovers. Recovery may take many paths. Six major ones are listed below.

In many cases the etiological agent is totally eliminated and the patient returns to full health.

In other cases, the patient shows a full recovery but the infectious agent is still present. Under these conditions the patient becomes a CARRIER and remains capable of shedding (spreading) the virulent form of the infectious agent for some period, perhaps for the remainder of their lives. This is the case for diseases like Typhoid, Herpes and HPV (Human Papilloma Virus).

Some carriers appear to be fully recovered, but the disease may be progressing slowly towards a fatal outcome, such as may occur with syphilis, #HIV and tuberculosis. Magic Johnson is probably such a case.

Some carriers, like those with herpes (shingles) and hepatitis have occasional outbreaks of the disease throughout their lives, but they are rarely fatal.

In many cases a disease becomes CHRONIC. The victim makes a partial recovery, but they are still less well than normal and continuously demonstrate symptoms of ill-health or have frequent relapses. Many infestations (worms and other large parasites) take this path. Lyme disease can become chronic.

In other cases, the patient recovers and eliminates the infectious agent, but their immune system has been damaged and they subsequently fall victim to an autoimmune disease like rheumatoid arthritis.


SUMMARY

As discussed in Chapter XIII, most of us are born with an efficient defense system, designed over millions of years by evolution to protect us from infectious disease. We can not change our heredity, but we can learn how to work with it to protect ourselves from disease. We are like a finely tuned racing car which will go the distance if run correctly. However, if we make choices that damage the mechanics of our bodies, or of the car, we can significantly shorten the lives of both and harm the efficiency of their running. Wise choices, based on a knowledge of how things work will not guarantee that harm will not come to you or the car, for the car may be destroyed in a random collision or you may contract a fatal disease through a paper cut or a stray cosmic ray, but it will increase the favorable odds. No degree of understanding about the mechanism of disease or immunity is capable of overcoming poor decisions regarding health habits and lifestyle.


SITES CONTAINING PICTURES THAT WILL TURN YOUR STOMACH (DO YOU HAVE THE GUTS TO LOOK?)

Click here to see an introduction to a large list of bacterial infections. View individual pathogen by visiting the various Volumes.

http://www.bact.wisc.edu/Bact303/Bact303pathogenesis; Excellent discussion on pathogens and pathogenic mechanisms.

Over 450 pictures of Parasites: Lot more frightening than any horror movie you'll ever see.

http://www-medlib.med.utah.edu/WebPath/INFEHTML/INFECIDX.html ; Lots of pictures of diseases, most are gross.

http://129.109.136.65/microbook/ch007.htm; Excellent discussion, with cartoons, on bacterial pathogenesis.


Click here for a self assessment test of what you have learned.


Copyright © Dr. R. E. Hurlbert, 1999.
This material may be used for educational purposes only and may not be duplicated for commercial purposes.
SCIENCE HALL, ROOM 440CA
PHONE: 509-335-5108
FAX: 509-335-1907
E-MAIL: hurlbert@wsu.edu or hurlbert@pullman.com

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